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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G06050.3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 314aa MW: 35007.4 Da PI: 9.2961 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G06050.3 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.9 | 5.8e-19 | 134 | 184 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GVr+++ +gr++AeIrdp++ +r++lg++g+aeeAa a+++ +++++g
OGLUM03G06050.3 134 SKYRGVRRRP-SGRFAAEIRDPKK---GRRVWLGTYGSAEEAAMAYDREARRIRG 184
89********.7*********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MGDVSPGERR ARRAMCGGAI LADFTPARVP RRLTAAELLP VTPTPPAAER RTTRKRKSDV 60 DFEAEFELFE DDDDDDEFEL SDDGDESLAV SCVSSPKPKA VPSFSFSSDV SSSSRPRRRV 120 AAAAAGRRKA SKKSKYRGVR RRPSGRFAAE IRDPKKGRRV WLGTYGSAEE AAMAYDREAR 180 RIRGKGARLN FPRDGDGSPR RSNDRPCWTI DLNLPAAAVS DQEALSAAKC KIKQCPRDEQ 240 MASATPELME EDASSSRNMV PLSMALQLQY AAMIAECDRE MEEIAAVERD LERRRRQVFE 300 RRGHLVRQAS LLLD
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 52 | 57 | TRKRKS |
2 | 127 | 142 | RKASKKSKYRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY323478 | 0.0 | AY323478.1 Oryza sativa (japonica cultivar-group) ap2 domain containing protein (cap2) mRNA, complete cds. |