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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G06050.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 315aa MW: 35396.8 Da PI: 8.5918 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G06050.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.9 | 5.9e-19 | 115 | 165 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GVr+++ +gr++AeIrdp++ +r++lg++g+aeeAa a+++ +++++g
OGLUM03G06050.2 115 SKYRGVRRRP-SGRFAAEIRDPKK---GRRVWLGTYGSAEEAAMAYDREARRIRG 165
89********.7*********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MGDVSPGERR ARRAMCGGAI LADFTPARVP RRLTAAELLP VTPTPPAAER RTTRKRKSDV 60 DFEAEFELFE DDDDDDEFEL SDDGDEISSD VSSSSRPRRR VAAAAAGRRK ASKKSKYRGV 120 RRRPSGRFAA EIRDPKKGRR VWLGTYGSAE EAAMAYDREA RRIRGKGARL NFPRDGDGSP 180 RRSNDRPCWT IDLNLPAAAV SGDDDDDAMA KLNLCWRRNL AHQEALSAAK CKIKQCPRDE 240 QMASATPELM EEDASSSRNM VPLSMALQLQ YAAMIAECDR EMEEIAAVER DLERRRRQVF 300 ERRGHLVRQA SLLLD
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 52 | 57 | TRKRKS |
2 | 108 | 123 | RKASKKSKYRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC079633 | 0.0 | AC079633.9 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence. |
GenBank | AK073133 | 0.0 | AK073133.1 Oryza sativa Japonica Group cDNA clone:J033023E13, full insert sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
GenBank | AY323478 | 0.0 | AY323478.1 Oryza sativa (japonica cultivar-group) ap2 domain containing protein (cap2) mRNA, complete cds. |