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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G03790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 141aa MW: 15268.7 Da PI: 6.7995 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G03790.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 13 | 64 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GVr ++ +g+++AeIrdp + +r++lg+f+taeeAa+a+++a+ +++g
OGLUM03G03790.1 13 SSYRGVRKRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARAYDRAAFAMKG 64
67********.**********8333..4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 141 aa
Download sequence Send
to blast |
MEDDKSKEGK SSSSYRGVRK RPWGKFAAEI RDPERGGARV WLGTFDTAEE AARAYDRAAF 60 AMKGATAMLN FPGDHHHGAA SRMTSTGSSS SSFTTPPPAN SSAAAGRGGS DRTTDKVELE 120 CLDDKVLEDL LTEANYRDKN Y
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC105734 | 0.0 | AC105734.2 Oryza sativa Japonica Group chromosome 3 clone OSJNBb0050N02, complete sequence. |
GenBank | AC137635 | 0.0 | AC137635.2 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
GenBank | AY339376 | 0.0 | AY339376.1 Oryza sativa (japonica cultivar-group) Ap23 mRNA, complete cds. |