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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G34210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 355aa MW: 37944.3 Da PI: 9.5158 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.2 | 2.3e-15 | 275 | 323 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+ +e+ OGLUM02G34210.1 275 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNDELQKKQDEML 323 79***************************************98876643 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-14 | 271 | 336 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.197 | 273 | 325 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.72E-11 | 275 | 325 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.5E-15 | 275 | 326 | No hit | No description |
Pfam | PF00170 | 2.6E-13 | 275 | 325 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.48E-24 | 275 | 327 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 278 | 293 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0010255 | Biological Process | glucose mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MDFPGGSGRQ QQQLPPMTPL PLARQGSVYS LTFDEFQSTL GGVGKDFGSM NMDELLRSIW 60 TAEESHAVGA ATTTTASVAA AEHAAVGAPP VQRQGSLTLP RTLSQKTVDE VWRDMMCFGG 120 GGASTAPAAA ETPPPAHRQQ TLGEITLEEF LVRAGVVRED MSVPPVPPAP TPTAAAVPPP 180 PPPQQQTPML FGQSNVFPPM VPPLSLGNGL VSGAVGHGGG GAASLVSPVR PVSSNGFGKM 240 EGGDLSSLSP SPVPYVFNGG LRGRKAPGIE KVVERRQRRM IKNRESAARS RQRKQAYMME 300 LEAEVAKLKE LNDELQKKQD EMLEQQKNEV LERMSRQVGP TAKRICLRRT LTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00186 | DAP | Transfer from AT1G45249 | Download |
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Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK072062 | 0.0 | AK072062.1 Oryza sativa Japonica Group cDNA clone:J013109E06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015625853.1 | 0.0 | bZIP transcription factor 23 | ||||
Swissprot | Q6Z312 | 0.0 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | A0A0D9YYL8 | 0.0 | A0A0D9YYL8_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM02G34210.1 | 0.0 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.2 | 5e-40 | ABRE binding factor 4 |