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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM02G25890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 471aa MW: 50544.5 Da PI: 8.6257 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM02G25890.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.2 | 4.9e-19 | 223 | 273 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge
OGLUM02G25890.1 223 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 273
59******9.**********955...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MDAVDRGGGG GGARGHGRRW KGKGVSAAIS SSAAETQQPV PVLEDAPAAA ALLRPQKKIR 60 SPDRRLQRSI SSLSLAPASP DSSSVSNPMS PPAMSLPNQP PSSRHIFPFA YDPSPGAAAP 120 RLLPLLQYSS LYPQPLLPQQ QSPLQNQQMI SFGSSQQQQK QQPQFGAASP LFPPQFLPPE 180 EQQRLLLRYW SEALNLSPRG VRGGALPPSL YQHLLRAPGP PKLYRGVRQR HWGKWVAEIR 240 LPRNRTRLWL GTFDTAEDAA MAYDREAFKL RGENARLNFP DLFLGKGRTG GSGRTSASAA 300 ASCSSSSSSA PPTPDESHTQ QAQPQPQQPT EESSNTEPKP LLFVAEQDGI PEPELNPQLQ 360 TAEQHGSDGN TAMFQPSVTS GGVWGPADEA WFSAWGPGSS VWDYDMDSAH GLLLQSRLAG 420 EQTGMDYAYT APEVLVAPVP AAGTAMATAA SSSLPPRPPP PCHSPTFAWK D
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK242986 | 0.0 | AK242986.1 Oryza sativa Japonica Group cDNA, clone: J090094O16, full insert sequence. |
GenBank | AP004768 | 0.0 | AP004768.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0010C01. |
GenBank | AP005513 | 0.0 | AP005513.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |