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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM02G20200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 319aa MW: 33396.6 Da PI: 12.196 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM02G20200.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59 | 1.2e-18 | 195 | 244 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa+a++aa ++++g
OGLUM02G20200.1 195 RYRGVRRRP-WGKWAAEIRDPR----KaARVWLGTFRTAEDAARAYDAAELRFRG 244
7********.**********94....36************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MSCSPPSISN ARFLGSWTFG PPPPPPSRSV AAAATTLLVR GSHARRSKRG ISGGAGCGGG 60 GGARGQATAV GASGAAAEDA RGYDAAALSF PEEASRPRAA RGRVTYSRVV LAVDRSRTGM 120 ARKISVRRRR REHGVLVGSW TSTSAAAAVR DAPGRARLTP LLRGSHGCNG TGDHAGEASV 180 AAAGVVVAAP ATARRYRGVR RRPWGKWAAE IRDPRKAARV WLGTFRTAED AARAYDAAEL 240 RFRGRRAKLN FPEEASRPRR PWKGHDVDHM SCSPPSIANA RFLGSWIFGP PPPSRSVAAA 300 TTTLLGGSHG SNGADNGRE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005611 | 0.0 | AP005611.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |