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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G10470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 274aa MW: 28489.1 Da PI: 6.4055 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.2 | 2.7e-11 | 147 | 193 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 kr +r NR +A+rsR RK+++i eLe+ v +L+ e +aL ++ OGLUM02G10470.1 147 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAF 193 899**********************************9999877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-13 | 143 | 207 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.611 | 145 | 201 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.5E-10 | 147 | 197 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.2E-11 | 147 | 201 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 147 | 201 | No hit | No description |
CDD | cd14703 | 7.31E-21 | 148 | 198 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 150 | 165 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence Send to blast |
MAQLPPRAPS AAAAAAAGQE WSAMAAAGEF LGFAAARRGA HRRSASDSAA FLMEAAVPMD 60 DVIVGVGGGG EFDRLDDEQL MSMFSDVEAP AVSDGGGGGG ERGPAGEAHL MDMGDGDDGM 120 GATSPAGAGA MAAAAAAAAA DGIADPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTTL 180 QMEVSALSPR VAFLDHQRSL LTVGNSHLKQ RIAALAQDKI FKDAHQEALK KEIERLRQVY 240 HQQQIKATGG ADIATAASMQ AKHELLACEG AAMR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By white light. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015622790.1 | 1e-138 | basic leucine zipper 19 | ||||
Swissprot | Q6K3R9 | 1e-139 | BZP19_ORYSJ; Basic leucine zipper 19 | ||||
TrEMBL | A0A0D9YPV4 | 0.0 | A0A0D9YPV4_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM02G10470.1 | 0.0 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 3e-57 | bZIP family protein |