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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM02G04330.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 214aa MW: 21748.1 Da PI: 6.9095 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM02G04330.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 23 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +gr++AeIrdp k++ ++lg+f++ae Aa+a++aa+++l+g+
OGLUM02G04330.1 23 RYRGVRRRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEAAARAYDAAARSLRGA 73
69*******.7*********83...36*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MRRARLPPAA AMAGVGVGEG EVRYRGVRRR PSGRYAAEIR DPAKKTPIWL GTFDSAEAAA 60 RAYDAAARSL RGAAARTNFP PSTSSSAPPP PPPQHQPPQH LPPAAAAATS SHSSTVESWG 120 VTVAAAAASA GALGLPPPRN GGSNPAADED CRSYCGSSSS VLCEDGASGA GDEAAAPRCS 180 PLPFDLNLPA SSPSAAAAAE ADEMDWRCDT LLHL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287559 | 0.0 | AK287559.1 Oryza sativa Japonica Group cDNA, clone: J065023L05, full insert sequence. |
GenBank | AP004843 | 0.0 | AP004843.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:B1103G11. |
GenBank | AP004871 | 0.0 | AP004871.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0419H03. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |