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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM01G46800.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
Trihelix |
Protein Properties |
Length: 307aa MW: 32423 Da PI: 8.8617 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM01G46800.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 76.2 | 5.3e-24 | 32 | 103 | 1 | 71 |
trihelix 1 rWtkqevlaLiearremeerlrrgklk.kplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
rWt++e+l+L++arr me+r rr+ + +W++vs+++r++g+er+p qC+++w nl+++ kki ++ek+
OGLUM01G46800.1 32 RWTRHETLVLLQARRAMEHRGRRSPQPvRLKWAAVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKNL 103
8**********************97764889**************************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MSGAANATSP AAGAGTPRSR XGAGTPRSRL PRWTRHETLV LLQARRAMEH RGRRSPQPVR 60 LKWAAVSAYC RRHGVERGPM QCRKRWGNLS WDLKKIVAWE KNLAAVVSGA GDNAVAAGEG 120 EGEAPPPPRL ESFWDMRGEQ RRARQLPSSF DREVYDALVG GHGAAPPSDF GEDLADGDGV 180 DADELPPPPL MVMPISATVS AKRGGAASDK NSTSQHDGGG GGGLKDSEAT YGAGVGGEEG 240 TTTATATATT TSIGRQVIEA LERGNRMLGD QLEAQRAAWD AEREQRVALL AAVDKLAGAV 300 CRIADKL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |