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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM01G08910.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 375aa MW: 39874.4 Da PI: 4.5451 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM01G08910.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 143 | 193 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+++AeIrd + r r++lg+f+taeeAak ++ a+ +l+g
OGLUM01G08910.1 143 PRFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDTAAIQLRG 193
689*******.**********88.....55*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048366 | Biological Process | leaf development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MEEEGFVALK RTEHVEVTSL AVAVEATPSA KGGKGKVVVG GGGAGGGVGP TRVRVFCDDF 60 DATDSSSDED EEEEVTARRR VKRYVQEIRL QRAAAVAVPP VKVKGEEVFP AAVSAKMAEA 120 AKARVVLAVG RKRKAGGVDG AEPRFRGVRR RPWGKYAAEI RDPWRRVRVW LGTFDTAEEA 180 AKVYDTAAIQ LRGRDATTNF NQSGDSASLD VPPEVAERVP QPPGASKNAS PATSYDSGEE 240 SHAAAASPTS VLRSFPPSAV VATADTANKK QPPPPPLVVR ETDESVDVFG CSFSDDGGFA 300 GELPPLYTDF DLLADFPEPP LDFLSNLPVE PFSLAPFSSN NGSPDLHLDD APSPAAAQVD 360 DFFQDITDLF QIPVV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK101054 | 0.0 | AK101054.1 Oryza sativa Japonica Group cDNA clone:J033015K21, full insert sequence. |
GenBank | AK106517 | 0.0 | AK106517.1 Oryza sativa Japonica Group cDNA clone:002-107-B02, full insert sequence. |
GenBank | AP001800 | 0.0 | AP001800.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0443E05. |
GenBank | AP002835 | 0.0 | AP002835.1 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0417G05. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |