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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM01G07430.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 228aa MW: 24572.5 Da PI: 6.419 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM01G07430.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 46 | 94 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++++g
OGLUM01G07430.1 46 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDVAALSIKG 94
9****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MAASEQSSES SSTASTSSCG KKQQVAGKRK REDVGGGAEQ AAAVAYRGVR MRAWGKWVSE 60 IREPRKKSRI WLGTFPCPEM AARAHDVAAL SIKGARAVLN FPDLAPALPR PASLAPRDVQ 120 AAAALAAVMH HHKHPSSSTS TSSPPAAPPP DEHHPRHEPQ QPESSREDDQ QQQPAAAAAA 180 QMAVAELVFD ELAPLWVEDV VEFGTSDHCW TAYDALDPIG FQPLLWEY
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108873 | 0.0 | AK108873.1 Oryza sativa Japonica Group cDNA clone:002-152-C11, full insert sequence. |
GenBank | AP003197 | 0.0 | AP003197.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:B1015E06. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
GenBank | AY339374 | 0.0 | AY339374.1 Oryza sativa (japonica cultivar-group) Ap21 mRNA, complete cds. |