 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART12G06770.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 478aa MW: 50471.1 Da PI: 7.0577 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART12G06770.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 68.4 | 1.2e-21 | 294 | 356 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L++e+++++ke+++l s++
OBART12G06770.1 294 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENASLRDEVNRIRKEYDELLSKN 356
89**********************************************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MGSSGADAPT KTSKASAPQE QQPPASSSTA TPAVYPDWAN FQGYPPIPPH GFFPSPVASS 60
PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFTPYAMA SPNGNADPTG 120
TTTTAAAAAA GGETDGKSSE GKEKSPIKRS KGSLGSLNMI TGKNSTEHGK TSGASANGAI 180
SQSGESGSES SSEGSEANSQ NDSHHKESGQ EQDGEVRSSQ NGVSRSPSQA KLNQTMAIMP 240
MTSSGPVPAP TTNLNIGMDY WANTASSTPA IHGKATPTAA PGSMVPGEQW VQDERELKRQ 300
RRKQSNRESA RRSRLRKQAE CEELAQRAEV LKQENASLRD EVNRIRKEYD ELLSKNSSLK 360
EKLEDKQHKT DEAGVDNKLQ HSGCRDGLVA ELMLGEVSED VSKDRFAPEA GPGAAVAGAS 420
LMRSSNMSGA GMECLDRNSI TWLSGMVAVD SILSLGIRKV VLCGIFSCTI LMSMTKVK
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 310 | 316 | RRSRLRK |
| 2 | 310 | 317 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | OSU04295 | 0.0 | U04295.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-1a) mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G32150.1 | 4e-91 | basic region/leucine zipper transcription factor 68 |
