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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
OBART11G03420.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 464aa MW: 50517.4 Da PI: 6.5093 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART11G03420.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 36.9 | 7.8e-12 | 180 | 208 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33
k rr+++NReAAr+sR+RKka+i++Le
OBART11G03420.1 180 KTMRRLAQNREAARKSRLRKKAYIQQLES 208
6679***********************96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MGEASSSSGH PRQNPHVLGY GFHGAMPNSL PSANLFEQQG GANYFGELEE ALMQQVATLR 60
RTQQTATTTS TLHHGDTTPF STTATAAATA RPPPTLDIFP SWPMRSLHTP KEGSNVTADT 120
TDSESSSKNN SNQNASSDQH VLVGDMAGQF DQIPQQEQHK KMATNSPTHS SKTGKALDPK 180
TMRRLAQNRE AARKSRLRKK AYIQQLESSK LKLAQMEQDI HRARSQGLLL GAPGGNTSSG 240
AAMFDVDYAR WLEEDSRRMA ELHGGLHAHL PDSDLRAIVD DTLTHYDHLF NLKGMAAKAD 300
VFHLITGMWA TPAERCFLWM GGFRPSELLK TLTPQLDPLT EQQVVGICNL QQSSQQAEEA 360
LSQGLDQLHQ SLAETVAGGS PLDDPNVGSF MGHMAIALGQ LSNLEGFVIQ AARCFLAIGE 420
YHNRLRALSS LWASRPREIL VADEGNCGEL SIAAHPSESQ YSAF
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK069411 | 0.0 | AK069411.1 Oryza sativa Japonica Group cDNA clone:J023013G15, full insert sequence. |
| GenBank | AK102690 | 0.0 | AK102690.1 Oryza sativa Japonica Group cDNA clone:J033103B09, full insert sequence. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Chern M, et al.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
BMC Genomics, 2014. 15: p. 461
[PMID:24919709] - Miyamoto K, et al.
Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
J. Plant Physiol., 2015. 173: p. 19-27
[PMID:25462074]
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