 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART11G02580.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GRAS |
| Protein Properties |
Length: 201aa MW: 22443.3 Da PI: 10.7863 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART11G02580.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 51.6 | 1.7e-16 | 108 | 179 | 255 | 318 |
GRAS 255 erflealeyysalfdsleaklpres........eerikvErellgreivnvvacegaerrerhetlekWrer 318
+rf+eal++y+a+fdsl+a ++++s +er+ vEr+++g+ei+ v+ ga+rrerh +l++W ++
OBART11G02580.1 108 ARFCEALHHYAAVFDSLDAAAAATSaasrlwspDERAQVERVVVGEEIKGVLLRDGAHRRERHDRLRQWARA 179
79***************99988888888999999***********************************876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MFSGTDASSP ELSLCSPYGP WTQGRSPTEE LGLALLEDWA HGEGHALPRA RHGPRRRRRR 60
VQAITDALID PSVYLDRRSV RAARRGFFEL SPFPKVAFVV GNRAIVEARF CEALHHYAAV 120
FDSLDAAAAA TSAASRLWSP DERAQVERVV VGEEIKGVLL RDGAHRRERH DRLRQWARAW 180
RWPGSPACRS ATPPSGRGTT W
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 48 | 59 | RARHGPRRRRRR |
| 2 | 50 | 59 | RHGPRRRRRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012619 | 1e-147 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |
