 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART10G19790.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 299aa MW: 32619.2 Da PI: 7.3324 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART10G19790.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.8 | 1.5e-30 | 152 | 210 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+++Hnh+
OBART10G19790.1 152 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRADPTMLVVTYTSDHNHP 210
699************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MCDSLFWQSS ADQGDLSDVV RASLQLQTAP RHQAASPPYV HLLGGGGGGG EDQLAAVSQH 60
DEQQQQSMVD ASAACDLLHA LLPPPPVVQV QQQGASRTRT TIEEDTTGDG EELFAGAHYV 120
VPPIKRRKSQ TKKVVCIPAG ASGGGGGEVV PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS 180
KGCSARKQVE RSRADPTMLV VTYTSDHNHP WPTHRNALAG STRPSSSNSS NIRLQDSTPV 240
HHQSQTGHDR LTTTHLKQED VIISPSLLQP DHHQLCTIID TKHHLLFHQD HPHSFGFFD
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC954610 | 0.0 | KC954610.1 Oryza sativa Japonica Group cultivar Dongjin WRKY2 mRNA, complete cds. |
