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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART10G18670.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
ERF |
| Protein Properties |
Length: 262aa MW: 28597.4 Da PI: 8.7726 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART10G18670.3 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.6 | 7.2e-19 | 105 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp k +r++lg+++ta eAa+a+++a+ +l+g
OBART10G18670.3 105 RYRGVRQRP-WGKYAAEIRDP---ArKGARVWLGTYDTAVEAARAYDRAAFQLRG 155
7********.**********8...4445*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005773 | Cellular Component | vacuole |
| GO:0005829 | Cellular Component | cytosol |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0098599 | Molecular Function | palmitoyl hydrolase activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MEYVVYCRAA PTRRRAMAGF GLDQHLDLIR AHLLDDAHHH VLAPSPSPSP PGTGRVRPAP 60
VSLPPRPPLL WAAASAAPRQ QEECFELGGG YAGEGEGEEE DDFRRYRGVR QRPWGKYAAE 120
IRDPARKGAR VWLGTYDTAV EAARAYDRAA FQLRGSKAIL NFPNEVAADA TVKWAPPVAP 180
IPAAAMSAGR GKRVRSEEQY YLREVKKERL IMAPPENSSS SSSSAAAAAG DIWDELKGIC 240
SLPPLSPLSP HPHMAFPQLF NT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and in leaves. Also strongly induced by cycloheximide, mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC079890 | 0.0 | AC079890.13 Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence. |
| GenBank | AC084763 | 0.0 | AC084763.4 Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence. |
| GenBank | AP014966 | 0.0 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
| GenBank | AY341826 | 0.0 | AY341826.1 Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP28 mRNA, complete cds. |
