 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART10G14440.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 273aa MW: 27667 Da PI: 8.4778 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART10G14440.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 104.2 | 7.6e-33 | 103 | 159 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++cprC s+ntkfCyynnys +qPry+CkaCrr+Wt+GG+lr+vPvGggr+++k++
OBART10G14440.1 103 PRQCPRCGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNSKRA 159
679***********************************************9998875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MSSPFLGSSS SSASSPLSYL TPPRPPPPPP PLLMVRHGLA RWLTDLDDEL MVFDDDLGVQ 60
GQGYAAAANG GIGGGGVEAV NAAAAPRQGG RHAGHPPLPR PPPRQCPRCG SANTKFCYYN 120
NYSRTQPRYL CKACRRHWTE GGTLRDVPVG GGRKNSKRAA GGGKAGATAS TAASAHVVAP 180
AAAPPTSSSF PDLLRQMLMA PATAGGGGGY SIDLTAWQQM AAFAAPPQAA TGDVGGAVGA 240
ASTAAPDANC GGGGVQYWNG WLQDDMPGLD GSC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC092489 | 0.0 | AC092489.4 Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence. |
| GenBank | AP014966 | 0.0 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012618 | 0.0 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
