 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART10G09860.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 290aa MW: 31313.4 Da PI: 9.2198 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART10G09860.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 82 | 1.2e-25 | 19 | 154 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lp Gf F Ptd++l+ L++k g++ +++++ +++++i++++P +L k ++ eek +yfFskr+ ++++kr+ r+++ g W+++g
OBART10G09860.1 19 LPIGFYFAPTDQDLL-AILEAKRLGRPlSRAHDAfFHDIRILDFHPAELYeKYANDEEKgYIYFFSKREFPTSSKKRPLRVAEGGAWNSSGAVY 111
699************.7799999999954445556**************8344444555455******************************99 PP
NAM 91 evlsk....kgelvglkktLvfykg..rapkgektdWvmheyr 127
+v+++ +g +vg kktLvf++ +++++kt+W ++e++
OBART10G09860.1 112 KVVKSsksgGGYDVGHKKTLVFHQRflGDKEAVKTNWAIQEFT 154
9999766666666**********7545677889********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MAAPEDGEDG NFGKNKRGLP IGFYFAPTDQ DLLAILEAKR LGRPLSRAHD AFFHDIRILD 60
FHPAELYEKY ANDEEKGYIY FFSKREFPTS SKKRPLRVAE GGAWNSSGAV YKVVKSSKSG 120
GGYDVGHKKT LVFHQRFLGD KEAVKTNWAI QEFTRIIGPQ NEVPDLAVYR LYKMRKEGRE 180
TPADLAADEA AAAAAMNNRG QQASAAAMAL PPPATGLPGG RMMSMADKAN MASTSKAYGP 240
SKSSSSQLQQ DAAAAAAPPN AAGASNWAPR PCNCQECAPA AGHVQLLTLF
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK242158 | 0.0 | AK242158.1 Oryza sativa Japonica Group cDNA, clone: J075155G16, full insert sequence. |
