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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART10G08900.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 266aa MW: 30555.2 Da PI: 10.8211 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART10G08900.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 83 | 5.9e-26 | 41 | 177 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkya..tgkrknratksgyWkatgkd 89
+p Gf F P+d el++ ++k v+gk + ++v+k+++i++++P L+ + +++ e+ +yfFskr+ +++ +++++ r++++g+Wka+g +
OBART10G08900.1 41 MPIGFYFIPKDLELLTILMCKLVRGKVPGAlNNVFKHIRILEFHPALLHeTYIETMEDgYIYFFSKRQFATKarNKRQPMRVADDGTWKASGGS 134
699**********************996551456**************8455655444366****99865443378889999************ PP
NAM 90 kevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127
k+v sk +g +vg k t+vfy + +++++kt+W +he++
OBART10G08900.1 135 KTVRSKkvGGIDVGQKFTMVFYerrFEGDRNPVKTNWGIHEFT 177
****99888899**********43313466778********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MGRTAAGAWG QRRQRWKQQQ RWKWKGKEKV VPEYGKNRHG MPIGFYFIPK DLELLTILMC 60 KLVRGKVPGA LNNVFKHIRI LEFHPALLHE TYIETMEDGY IYFFSKRQFA TKARNKRQPM 120 RVADDGTWKA SGGSKTVRSK KVGGIDVGQK FTMVFYERRF EGDRNPVKTN WGIHEFTKII 180 PGTKNQLEDL AVYRVYKIRR KEDTEPVNAA AAVSSTDEPS TPAALPLPTP PPRPLPDMAG 240 SSSATRLMPS PQICRPHHTT REHRRD
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC122144 | 1e-136 | AC122144.1 Oryza sativa Japonica Group chromosome 10 clone OSJNAa0011L09, complete sequence. |
GenBank | AP014966 | 1e-136 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |