 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OBART10G08890.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
NAC |
Protein Properties |
Length: 406aa MW: 44376.3 Da PI: 5.1001 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART10G08890.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 83.1 | 5.7e-26 | 36 | 172 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeek..ewyfFskrdkkya..tgkrknratksgyWkatgkd 89
+p+G F P+d el +k v+g+ l++v+++++i++++P L+++++++e+ +yfFskr+ +++ +++r++r++k g+Wka+g +
OBART10G08890.1 36 MPVGWYFVPKDLELFAILRCKLVRGQLpSALNNVFEHIRILEFHPALLHETYSGNEEdgYIYFFSKRQFTTKagNKRRPTRVAKGGTWKASGGS 129
699************7766666777663444556999***********9544443333366****99865553378899*************** PP
NAM 90 kevlsk..kgelvglkktLvfyk...grapkgektdWvmheyr 127
k+v sk +g ++g k t+vfy+ ++++++ kt+W mhe++
OBART10G08890.1 130 KTVRSKkvGGIDIGQKLTMVFYErrfEDDRNPIKTNWGMHEFT 172
****99888889**********62224677888********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MAEQPPEGSG GGGNNNGKWK GKEKVVPEYG KNRHGMPVGW YFVPKDLELF AILRCKLVRG 60 QLPSALNNVF EHIRILEFHP ALLHETYSGN EEDGYIYFFS KRQFTTKAGN KRRPTRVAKG 120 GTWKASGGSK TVRSKKVGGI DIGQKLTMVF YERRFEDDRN PIKTNWGMHE FTKIIDGTKN 180 QLEDLAVYRL YKIKRKEDEE PSNTAAAASS TDEPSTSSAL PPPTPPRPLP DMAGPSSATP 240 LLPLQLPGLA GSSSAMSLPA LQLSPAPPPA VDHHHRLSPP HDAAGSNYNH PELADYNGGV 300 QAQHEHQYHP QEPQASLVDA EDGYSAMAGG DDAQLGGAEL DTERIAEMVN HIMDGEFEFK 360 FEDNTVLKYN EVFPDNDEVV AAPMMIDGGR DGDGADGGDG DDPFDN
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC092388 | 0.0 | AC092388.5 Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence. |
GenBank | AC122144 | 0.0 | AC122144.1 Oryza sativa Japonica Group chromosome 10 clone OSJNAa0011L09, complete sequence. |
GenBank | AP014966 | 0.0 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |