 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART09G07580.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
LBD |
| Protein Properties |
Length: 234aa MW: 24525.1 Da PI: 4.123 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART09G07580.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 32.5 | 2.5e-10 | 1 | 43 | 58 | 100 |
DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
m++l++eA+ara+dPv Ga++v+ +l +q+e l+aela+++++
OBART09G07580.1 1 MQALTFEANARASDPVGGAARVVVELCRQYEMLHAELAAVQHH 43
899*************************************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MQALTFEANA RASDPVGGAA RVVVELCRQY EMLHAELAAV QHHLKLCRQQ HAAAAAAAAN 60
DPLVANVDPL ADTAAEMLFA GAVVPNQNDD AMVDAFYADQ QTAGDGDQEQ YLVKDEALAA 120
QPPPQQPYEY LNYGTAGDEG SSHAWYTGNG GDADASPPMG LSDQLQQCQI GAAPPFDVKP 180
ELPATMEHGG SVFVEQPEQK ILPAAGSSSS AAAHCQLELG CSSNAWKVGT HVIN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK071233 | 0.0 | AK071233.1 Oryza sativa Japonica Group cDNA clone:J023082A13, full insert sequence. |
| GenBank | AP005675 | 0.0 | AP005675.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OJ1001_G09. |
| GenBank | AP014965 | 0.0 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |
