 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART09G04710.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 153aa MW: 17165.2 Da PI: 9.0017 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART09G04710.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 46.2 | 9.6e-15 | 29 | 82 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
e kr rrk++NRe+ArrsR RK++ ++eL+ v +L+++N++L l+ +++
OBART09G04710.1 29 EKKRKRRKESNRESARRSRMRKQQHLDELTSQVNQLKNQNQQLSMALSLTTQNL 82
679****************************************98887766655 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 153 aa
Download sequence Send
to blast |
MSSGTSSGSS QGTRSSRSED DLNLQAQMEK KRKRRKESNR ESARRSRMRK QQHLDELTSQ 60
VNQLKNQNQQ LSMALSLTTQ NLVAVQAQNS VLQTQEMELQ SRLCALTDIL MCMNNTSATP 120
TPTIPATTTS ACDIFGASSW NQPPIDLYQY QCF
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 29 | 34 | KKRKRR |
| 2 | 29 | 35 | KKRKRRK |
| 3 | 30 | 35 | KRKRRK |
| 4 | 31 | 36 | RKRRKE |
| 5 | 43 | 50 | RRSRMRKQ |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK064903 | 0.0 | AK064903.1 Oryza sativa Japonica Group cDNA clone:J013000L18, full insert sequence. |
| GenBank | AK072360 | 0.0 | AK072360.1 Oryza sativa Japonica Group cDNA clone:J023058F04, full insert sequence. |
| GenBank | AK098869 | 0.0 | AK098869.1 Oryza sativa Japonica Group cDNA clone:J013001A19, full insert sequence. |
| GenBank | CT833039 | 0.0 | CT833039.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA019A05, full insert sequence. |
| GenBank | CT833040 | 0.0 | CT833040.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105H15, full insert sequence. |
