 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART08G22330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 235aa MW: 24437.8 Da PI: 8.3624 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART08G22330.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 28.2 | 3.5e-09 | 95 | 121 | 5 | 34 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...T CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskap 34
h e+Er+RR+++N +f eLr +P+a
OBART08G22330.1 95 HVEAERQRREKLNRRFCELRAAVPTA---E 121
889**********************8...3 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MDELVLSPSS FSATACFPTL DFEFCEVPNQ WLLGLGHDEL DKDAAASALA AAAASQSASN 60
DDVPRNPPAT TTTTKRRGRK PGPRSGGGGA PPIGHVEAER QRREKLNRRF CELRAAVPTA 120
EARRAPLAPS AAAAAAWAAG LGAGAIGRDD LVVRMVGRDA AILRLTTAAA AARHAPARMM 180
CAVRALNLAV QHASVARVGG ATVQDVMVDD VPAALQDEAR LRAALLHTLQ LADTT
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003914 | 0.0 | AP003914.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OJ1521_G02. |
| GenBank | AP004632 | 0.0 | AP004632.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0623F08. |
| GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
