 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART08G17810.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 144aa MW: 15736 Da PI: 10.696 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART08G17810.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 51.1 | 3e-16 | 69 | 112 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+k+
OBART08G17810.1 69 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKK 112
79***************************************976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 144 aa
Download sequence Send
to blast |
MGNGLMSGVA GIGGGAITVA PVDTSVGQMD SAGKGDGDLS SPMAPVPYPF EGVIRGRRSG 60
GNVEKVVERR QRRMIKNRES AARSRARKQA YTMELEAEVQ KLKEQNMELQ KKQVLEAVNN 120
PYGQKKRCLR RTLTGPWNVG EIHI
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB023288 | 0.0 | AB023288.1 Oryza sativa Japonica Group mRNA for TRAB1, complete cds. |
| GenBank | AY323482 | 0.0 | AY323482.1 Oryza sativa (japonica cultivar-group) bZIP transcription factor (aba1) mRNA, complete cds. |
| GenBank | KT037117 | 0.0 | KT037117.1 Oryza sativa Indica Group cultivar Nonabokra abscisic acid inducible bZIP protein (TRAB1) mRNA, complete cds. |
| Publications
? help Back to Top |
- Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1.
Plant Cell, 2002. 14(12): p. 3177-89
[PMID:12468735] - Kobayashi Y, et al.
Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
Plant J., 2005. 44(6): p. 939-49
[PMID:16359387] - Kobayashi F,Maeta E,Terashima A,Takumi S
Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
Physiol Plant, 2008. 134(1): p. 74-86
[PMID:18433415]
|
