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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART08G16250.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 246aa MW: 26558.2 Da PI: 4.5502 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART08G16250.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 32.7 | 1.8e-10 | 25 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +g+W+A+I + g +k+ +l t eeAa a++ a+ + +g
OBART08G16250.1 25 SKYRGVARHHHNGKWEARIGRvF---G-NKYLYLA---TQEEAAVAYDIAAIEHRG 73
89****99**********99966...3.5****77...89***********99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGKWE ARIGRVFGNK YLYLATQEEA 60 AVAYDIAAIE HRGLNAVTNF DINLYIRWYH GSCRSSSAAA ATTIEDDDFA EAIAAALQGV 120 DEQPIGLLLR SPKFKEIIEQ AAAAAASSSG SSSSSSTDSP SSSSSSSLSP SPLPSPPPQQ 180 QPTVPKDDQY NVDMSSVAAA RCSFPDDVQT YFGLDDDGFG YPEVDTFLFG DLGAYAAPMF 240 QFELDV
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK106769 | 0.0 | AK106769.1 Oryza sativa Japonica Group cDNA clone:002-115-F07, full insert sequence. |
GenBank | AP004764 | 0.0 | AP004764.2 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0708B04. |
GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
GenBank | CP012616 | 0.0 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |