 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART08G13190.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NF-YB |
| Protein Properties |
Length: 217aa MW: 23829.7 Da PI: 6.5027 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART08G13190.2 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 55.7 | 1.2e-17 | 18 | 79 | 26 | 87 |
NF-YB 26 kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87
k+++da++++ ec +efi +++se+++ c re++kti+++ +l al +lGf +y+e++++
OBART08G13190.2 18 KLARDAQDLLVECCVEFINLLSSESNEVCSREDKKTIAPEHVLRALQDLGFREYIEEVQAAY 79
89******************************************************998754 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MDPMDIVGKS KEDVSLPKLA RDAQDLLVEC CVEFINLLSS ESNEVCSRED KKTIAPEHVL 60
RALQDLGFRE YIEEVQAAYE HHKHDTLDSP KASKFTGVEM TEEQAVAEQQ RISILNHNNS 120
PHSCSRNLSS ISNRSCSRSR RQSCNHSHNR KQNMAWTGPI RSQISLGLNP STLAIQSPLP 180
PSLSSLELEE SGAVPATSGL SFLSHATAAL GRTGHCA
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF464902 | 1e-150 | AF464902.1 Oryza sativa repressor protein (Dr1) mRNA, complete cds. |
| GenBank | CT830130 | 1e-150 | CT830130.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA058B22, full insert sequence. |
| GenBank | CT841564 | 1e-150 | CT841564.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C104G12, full insert sequence. |
