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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART08G07280.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WOX |
Protein Properties |
Length: 177aa MW: 19352.8 Da PI: 5.9177 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART08G07280.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 19.7 | 1.5e-06 | 40 | 74 | 2 | 35 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAk 35
r+R+t+++eq+ +Le+ F++ +p ++e +++ +
OBART08G07280.1 40 RSRWTPKPEQILILESIFNSgMVNPAKDETARIRR 74
89*****************99******99999876 PP
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2 | Wus_type_Homeobox | 63.9 | 3.2e-21 | 39 | 86 | 2 | 49 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkN 49
+r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+N
OBART08G07280.1 39 VRSRWTPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDAN 86
589********************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MDRTATASWE VMSRRGEQQQ QLMMQAPARH AAAAAGEPVR SRWTPKPEQI LILESIFNSG 60 MVNPAKDETA RIRRLLERFG AVRDANMGLM ARHGGGDHHY SSYADSDATQ LSYQPTGTIQ 120 VFINGVAYDV PSGGALDMAG TFGRDAMLVH SSGEVLPVDE HGVLINSLQM GECYYLL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK107305 | 1e-147 | AK107305.1 Oryza sativa Japonica Group cDNA clone:002-126-D01, full insert sequence. |