PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART07G26790.1
Organism
Oryza barthii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 275aa    MW: 29399 Da    PI: 9.4298
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART07G26790.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.8e-15184226547
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                      +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  OBART07G26790.1 184 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 226
                      79***************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-15177226No hitNo description
SMARTSM003381.0E-14180249IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335182226IPR004827Basic-leucine zipper domain
PfamPF001703.3E-12184226IPR004827Basic-leucine zipper domain
CDDcd147074.63E-22184225No hitNo description
SuperFamilySSF579594.5E-11184227No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MGVHAMSCHG GGGGGGGGEG ALSRQGSVYS LTLNEVESHL GEPLRSMNLD DLLRTVLPAA  60
AAAAETAGRK TVDEVWRDIQ GASTGRHHAT PMGEMTLEDF LSRAGVAVDG AASAASAHWL  120
RGHYPPPPPT TTTLQYVGGS GAVVDGVYNR VDGHGVAGFL SQVGGAGRKR GGGVDGVVEK  180
TVERRQKRMI KNRESAARSR ARKQAYTNEL ENKISRLEEE NQRLREHKAV ADFSTFPSCV  240
DFLKAFLTQK LEPVMQIVPQ PEPKQQLRRT TSASF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1109150.0AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645810.11e-175ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0D3GV540.0A0A0D3GV54_9ORYZ; Uncharacterized protein
STRINGOBART07G26790.10.0(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-44bZIP family protein