 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART07G08160.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 136aa MW: 14790.9 Da PI: 10.6223 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART07G08160.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 118.9 | 1.9e-37 | 73 | 126 | 2 | 55 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr 55
+e lkcprCdstntkfCy+nnysl+qPr+fCkaCrryWt+GGalrnvPvGgg
OBART07G08160.1 73 PEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRNVPVGGGL 126
56789***********************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 136 aa
Download sequence Send
to blast |
MWNQHQAHHG HHQLHQSVEA NQLPMTSASL LLAPRPPDMA AAGILPVSGG GGASSARPAS 60
MAERARMAKI PQPEPGLKCP RCDSTNTKFC YFNNYSLTQP RHFCKACRRY WTRGGALRNV 120
PVGGGLPPQQ ARNQAL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. {ECO:0000269|PubMed:12887587}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By auxin and salicylic acid (SA). Repressed by jasmonic acid (JA). {ECO:0000269|PubMed:10758484, ECO:0000269|PubMed:12887587}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK068542 | 0.0 | AK068542.1 Oryza sativa Japonica Group cDNA clone:J013155H18, full insert sequence. |
| GenBank | AP004303 | 0.0 | AP004303.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0407H12. |
| GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
