PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART07G07520.1
Organism
Oryza barthii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 330aa    MW: 35349.9 Da    PI: 6.9164
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART07G07520.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN342.41.6e-13106192152227
                      S.SSSSS-..TTS--TTT--...HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHT CS
             EIN3 152 m.qhcdpp..qrrfplekgv...epPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirel 227
                      m q c+pp   rr     ++   +pPWWP+ +e wwg+  +++  g     + p+  p+ l ka kv+vL av++h++p++ ++   
  OBART07G07520.1 106 MaQECTPPlvARRDRKSGATpppPPPWWPKAEEPWWGTEVAAHLRGrrmatPVPFASPRRLAKAEKVAVLVAVVRHVAPDFGRLAAA 192
                      44888888553555555555111578***********6654444447899888***************************9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.101.2E-2985197IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.4E-3388197IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048734.9E-1489195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MASSSSGKRV SSSSTSSHQQ HAKRRRRAPG DELSQTHGVA RNAVAAMPMV GVAPLMLSPV  60
TMQAQLLCYV AMPMAPVAGG GGGGVPLAAA LCRLRNGTLE RMVREMAQEC TPPLVARRDR  120
KSGATPPPPP PWWPKAEEPW WGTEVAAHLR GRRMATPVPF ASPRRLAKAE KVAVLVAVVR  180
HVAPDFGRLA AAAGRVQADR ARVLHMGERA PRRAQAPLRR PEPESADQTA VDFSVSGEDT  240
VTTGPELEQL VGDGNGATVE GEGQKTEDSP VPPLLEQHGG EDHDHHRQHG GFSGEVSGAA  300
PEDVDWFDYD EVLRGLDELE IPSFFGGYYI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037400.0AP003740.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1118_B03.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645905.11e-165putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A0D3GNR50.0A0A0D3GNR5_9ORYZ; Uncharacterized protein
STRINGOBART07G07520.10.0(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1804988