PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

OBART06G27730.1

Organism

Oryza barthii

Taxonomic ID

65489

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 139aa MW: 15040.8 Da PI: 4.9776

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OBART06G27730.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	4.7e-13	93	124	3	34
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 +++r++r+++NRe+A rsR+RK+a++eeLe++ OBART06G27730.1 93 DDRRTIRMMRNRESALRSRARKRAYVEELEKE 124 589**************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.554	93	124	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-9	94	124	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.05E-8	95	129	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.7E-9	95	124	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence Send to blast
MANYHHQEYY QMAAAAVAWP REPDSPQLSI MSGCSSLFSI STLRDDDDGG VRLAGAALPA 60 TPVSLAGIAG GASTPGGDEV DMEVRQQSGG SGDDRRTIRM MRNRESALRS RARKRAYVEE 120 LEKEGSGMRE DIVCRCMAD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CT834745	0.0	CT834745.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103J07, full insert sequence.
GenBank	CT834747	0.0	CT834747.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126G01, full insert sequence.
GenBank	CT834748	0.0	CT834748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223H09, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015642449.1	2e-78	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_015643092.1	2e-78	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_015643093.1	2e-78	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_015643094.1	2e-78	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_015643106.1	2e-78	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_015643107.1	2e-78	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBL	A0A0D3GKY3	1e-96	A0A0D3GKY3_9ORYZ; Uncharacterized protein
STRING	OBART06G27730.1	2e-97	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4017	30	72

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	7e-09	abscisic acid responsive elements-binding factor 2