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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART06G22080.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 360aa MW: 37703.6 Da PI: 9.9597 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART06G22080.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 44.1 | 5.3e-14 | 74 | 126 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G r ++ +g+++AeIr + ++ r++lg+fgtaeeAa a++ a+ ++g
OBART06G22080.1 74 KYRGARKRP-WGKYAAEIRIR---NtmgVKERVWLGTFGTAEEAAWAYDTAATVIHG 126
8********.**********5...445588*********************987765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MGRPVKQKTT TWLGEINTDG LAALAAEAEG FAAANGEGWV APAVEGEGEG FVGAPVVEGE 60 EGLTAELPVA AERKYRGARK RPWGKYAAEI RIRNTMGVKE RVWLGTFGTA EEAAWAYDTA 120 ATVIHGDKAT TNFPRAPLRP ATTPVMRSML VFFGIAHLVR SLVPRARGPR GRGGGAGGRG 180 RSRRRRAAAA AAPSAPASEA PPPPPPPSSA LVPEPELQVQ GGRGERGRGR GRGRGGGRRG 240 RRGRGRTPAR VVAEDSPMLQ ATTPAAAPAL APAPANQAIF QPMIIPPGGG VVAPDDFLLS 300 AISDDEPVLP HKKPKLLGVY TPPDSPDQFV MEFFADLGDG DDILSSSFWQ DPAGDGEDTQ
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 225 | 234 | RGRGRGRGRG |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005386 | 0.0 | AP005386.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |