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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART06G17710.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
G2-like |
Protein Properties |
Length: 538aa MW: 57947.9 Da PI: 6.5485 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART06G17710.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 99.8 | 1.8e-31 | 125 | 178 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
OBART06G17710.1 125 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 178
8****************************************************7 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 538 aa
Download sequence Send
to blast |
MGEVKEKEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEGF GEGSEEGGVG EDGDEEDDDE 60 DDDDDDDGGS TSEVAGGGRS SSNNSSTNHN SGSDKDHDMN SSSSKADGGG DRVPTVRQYN 120 RSKLPRLRWT PDLHMAFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK 180 LDHESGHERG AISSVFSPME FHMRRGDHRF HHHDMFFQRA AAAGVSPFSS RMLHENGGGF 240 FASRNPGLPE SSRLYGLFQR RQQAPMQKFD FKNCNSFSRN QEWAFNQQHA AARAAGAVNG 300 HGPAKGLIHE MIFRKEGKPT SHLFDVRDAI ASTRVTSATT AAAADHRLDG AGKAGNFDWI 360 GSSSSRPLTR TMSAATAATM GDHHHLRWRG GAAGSGNTTA SSDPVVASEA ALGSLLERAK 420 TKATEAMRLE TPVKMTAAAV AAEEINGRTP DLQLSLSPNA GDHRSAGKKR KFLSEQEVDS 480 DKQQLPLTLS LSLRGGGDNG GGEAAGRLEE EMTGSSSSKK AALGLSTLDL TMSIKALE
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 7e-18 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 7e-18 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 7e-18 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 7e-18 | 126 | 180 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK073606 | 0.0 | AK073606.1 Oryza sativa Japonica Group cDNA clone:J033048N17, full insert sequence. |