PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 341aa MW: 37883 Da PI: 9.0111

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OBART06G10160.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	49	89	4	44
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k +rr+++NReAAr+sR RKka+i++Le +L ++ OBART06G10160.1 49 QKMQRRLAQNREAARKSRMRKKAYIQQLESSRSKLMHLEQE 89 589**************************977777655544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-7	46	145	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.588	48	92	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.06E-7	50	93	No hit	No description
Pfam	PF00170	1.2E-7	50	90	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.4E-8	50	94	No hit	No description
PROSITE pattern	PS00036	0	53	68	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.7E-31	135	211	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MAPSSLLIIF FLLPTSRSSA LGGGDGGDDA GEQRGADSSA VSKERRGDQK MQRRLAQNRE 60 AARKSRMRKK AYIQQLESSR SKLMHLEQEL QRARQQGIFI ATGGSGDHGH SIGGNGGTLA 120 FDLEYARWLD EHQRHINDLR VALNTQMSDD ELRELVDAVM MHYDQVFRLK SFATKSDVFH 180 VLSGMWMSPA ERFFMWLGGF RSSELLKVLA SHLEPLTDQQ LMGICNLQQS SQQAEDALSQ 240 GMEALQQTLG DTLASAAATV VGGGGGADNV TNYMGQMAIA MAKLTTLENF LRQADLLRHQ 300 TLQQMHRILT TRQAARALLV ISDYFSRLRA LSSLWLARPR D

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK109719	0.0	AK109719.1 Oryza sativa Japonica Group cDNA clone:002-146-A04, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015642107.1	0.0	transcription factor TGAL3-like isoform X1
Refseq	XP_025881815.1	0.0	transcription factor TGAL3-like isoform X2
Swissprot	Q5Z6N9	0.0	TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBL	A0A0D3GF46	0.0	A0A0D3GF46_9ORYZ; Uncharacterized protein
STRING	OBART06G10160.1	0.0	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP486	38	185

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-121	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]