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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
OBART06G07070.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
bZIP |
| Protein Properties |
Length: 336aa MW: 35966.3 Da PI: 7.2736 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART06G07070.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 44.1 | 4.4e-14 | 244 | 298 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
+r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++ +L+ ++ ++++k k+e
OBART06G07070.1 244 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQ---KKQVEMIQKQKDE 298
79*************************************998...5555555555555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MELPADGSAL ARQGSIYSLT FDEFQSALGS AGKDFGSMNM DELLRNIWTA EESQAIAPAA 60
AAASAAAVVG DAQQQQQPIQ RQGSLTLPRT LSQKTVDEVW RDIMGLGGDD DEDPAAAAAA 120
AAPAQRQPTL GEMTLEEFLV RAGVVREDMG QTIVLPPQAQ ALFPGSNVVA PAMQLANGML 180
PGVVGVAPGA AAAMTVAAPA TPVVLNGLGK VEGGDLSSLS PVPYPFDTAL RVRKGPTVEK 240
VVERRQRRMI KNRESAARSR ARKQAYIMEL EAEVAKLKEQ KAELQKKQVE MIQKQKDEVM 300
ERITQQLGPK AKRFCLRRTL TGPCLLDGRM LASITH
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130, ECO:0000269|PubMed:26300907, ECO:0000269|PubMed:27468891}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK103188 | 0.0 | AK103188.1 Oryza sativa Japonica Group cDNA clone:J033121M03, full insert sequence. |
| GenBank | AK105312 | 0.0 | AK105312.1 Oryza sativa Japonica Group cDNA clone:001-117-D06, full insert sequence. |
| GenBank | GU552783 | 0.0 | GU552783.1 Oryza sativa Japonica Group putative expressed bZIP transcription factor mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Hossain MA, et al.
The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice.
J. Plant Physiol., 2010. 167(17): p. 1512-20
[PMID:20576316] - Yang X, et al.
Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes.
Plant Physiol., 2011. 156(3): p. 1397-409
[PMID:21546455] - Li YS, et al.
A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice.
Mol. Biotechnol., 2013. 54(2): p. 703-10
[PMID:23086454] - Guo C,Ge X,Ma H
The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages.
Plant Mol. Biol., 2013. 82(3): p. 239-53
[PMID:23686450] - Huang X, et al.
OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.).
ScientificWorldJournal, 2014. 2014: p. 809353
[PMID:25089296] - Kim N, et al.
Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts.
Front Plant Sci, 2015. 6: p. 614
[PMID:26300907] - Chen H, et al.
Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice.
Genet. Mol. Res., 2015. 14(4): p. 11994-2005
[PMID:26505346] - Tang N, et al.
MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice.
Plant Cell, 2016. 28(9): p. 2161-2177
[PMID:27468891]
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