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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART06G06220.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 183aa MW: 20286.7 Da PI: 4.6425 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART06G06220.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.3 | 7.8e-18 | 16 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr + +g+WvAeIr p++ r+r++lg+++++e+Aa+a +aa +l+g
OBART06G06220.1 16 KYRGVRLRQ-WGKWVAEIRLPNS---RRRIWLGSYDSPEKAARAFDAAFICLRG 65
8*****998.**********933...5*********************999998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001944 | Biological Process | vasculature development |
GO:0002213 | Biological Process | defense response to insect |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009611 | Biological Process | response to wounding |
GO:0051301 | Biological Process | cell division |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MQANGTLPAP EKVMRKYRGV RLRQWGKWVA EIRLPNSRRR IWLGSYDSPE KAARAFDAAF 60 ICLRGGEAIA GLNFPESPPT VVARTSDPRE VLAYATLHAN RLSSDATIAQ EEAALLEEET 120 AEQFSDVVRA NAAPPPPPVQ VAGGSFDWSQ LPLYSPMTTP TAEHWEEDNV EATTSDNLWS 180 FDF
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |