 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART06G03090.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 526aa MW: 55923.7 Da PI: 7.4518 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART06G03090.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.6 | 1.7e-30 | 275 | 334 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+a+d +++++tYeg+Hnh+
OBART06G03090.1 275 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQVQRCADDMSILITTYEGTHNHP 334
58***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006952 | Biological Process | defense response |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MIKGDSKQLA SMYMKEEMIK GERQLGTHED RLKDEVIKDG DKISDGNFFK SLQNISSTKE 60
EVCSPGPIER SCMDSSLLNM KAQNKGQDDK LESTRAEMGE VREENERLKT LLSRISHDYR 120
SLQTHFYDVL QQGRAKKLPD SPATDIEEPE FVSLRLGTSR SKCKKEDKST TSSEVKGSTE 180
DFLKIKGGLS LGLSDCRVDA NNSEKVQPDV MTLSPEGSFE DARDDTAETT EQWPPSKMLK 240
NLRSVGAEAE DDIAPQPQVK KARVSVRARC DAPTMNDGCQ WRKYGQKIAK GNPCPRAYYR 300
CTVAAGCPVR KQVQRCADDM SILITTYEGT HNHPLSVSAT AMASTTSAAA SMLISGSSST 360
SLAAYPAAAA SPALAFDASS KPPLIGGRPI NGSRQQGGGG GGGSAPPLYQ MQQKAAAAAP 420
PPPSVITDTI AKAITADPSF HTALAAAITS YVGKKGSPPA SGGEDSKVEL KWGEHLGLGL 480
THSSPSTAAA AAASSSSQMF LQPSLGLSGS TTSASTSPVA NREQAH
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
