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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART05G27320.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 253aa MW: 27434.6 Da PI: 5.4082 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART05G27320.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 84.3 | 1.1e-26 | 98 | 156 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s C+++k vers e p v++itY eH h
OBART05G27320.1 98 TDLWAWRKYGQKPIKGSPYPRGYYKCSSLkACMARKMVERSPEKPGVLVITYIAEHCHA 156
699************************9989*************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MEYSNDWDLQ ALVRSCGTAV ADSEPEPPAA PSTSRERGEG GEHEVLISFP AIASTSGQGR 60 KQPGRKPGVR TARPKRSKKS HLKKVVCEVP VADGGVSTDL WAWRKYGQKP IKGSPYPRGY 120 YKCSSLKACM ARKMVERSPE KPGVLVITYI AEHCHAVPTQ LNSLAGTTRN NKPASPDQQQ 180 QQQPSPGGAS TDEAAAAAAK TEDSADTTCS MADDENDLWA PVEMDMDDFF GPFDDDLDHF 240 LDDDAVLGRR LSL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012613 | 0.0 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |