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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART05G21230.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 330aa MW: 37230.1 Da PI: 8.6612 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART05G21230.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 33 | 1.3e-10 | 47 | 88 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L+
OBART05G21230.1 47 KTLRRLAQNREAARKSRLRKKAYVQQLEDSRMKLTQLEQELQ 88
6789************************99888888776654 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MVYASPGTDA STDPDIDKNI RMFEQGDPPT PIAYCPREKS KGKLGQKTLR RLAQNREAAR 60
KSRLRKKAYV QQLEDSRMKL TQLEQELQRA RQQGIIISTS GDQQRSTSEN EALAFNMEYM 120
RWLEEHNKQI NELRSAVHTH AGDDDLQSIV SSVMAHHEEI FRIKGLAAKA DVLHVLSATW 180
RTPLERCFLW LGGFRPSDLL KLLADQLEPL TEQQLASIYN QQQSSQQAEE TLSQGMEIIQ 240
DSLAKTVASQ LGRAGSSSPS NAADHTAAAL GKIGDMESLL QQADDLRMQS LQKMQRVLTT 300
RQFARALLLV SDYFSRLRAL NSLWIARPQQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC129718 | 1e-146 | AC129718.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0088I06, complete sequence. |
| GenBank | AP014961 | 1e-146 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
