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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART05G17860.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 271aa MW: 27828.1 Da PI: 4.6896 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART05G17860.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 43.6 | 7.2e-14 | 79 | 119 | 12 | 55 |
AP2 12 rgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+ W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g
OBART05G17860.1 79 TYTWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 119
678*******7.....337************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MADQRRRFRG GGDWQASVDD VVDDGGDYGH GAQGSYYYYG AAPTSTPEFV AGGQQEQLSS 60 DVPQGGASLG LAMDEHSPTY TWAAEIRDPH KAARVWLGTF ETAEAAARAY DEAALRFRGS 120 RAKLNFPEDA RLSSPPAGAG AGGATAAAQP VPVAYPASAV SDYLQYQMLL HGGGGGGGGR 180 YPLYYGGGAA AAMSSSLGPY SSIPTSSVTV ASVPSSSSAA SSSSGYGAPA EHGEAVQWTS 240 WPDGGGWTYP ATTSSWSGSS QYPPPPRPPQ Q
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC105318 | 0.0 | AC105318.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1058_F05, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |