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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART05G12580.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 418aa MW: 45097.2 Da PI: 4.5349 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART05G12580.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.2 | 2e-18 | 132 | 182 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr++ +g+WvAeIr+p + r r +lg+f tae Aa a+++a+++++g
OBART05G12580.1 132 CDFRGVRQRT-WGKWVAEIREP---N-RqSRLWLGTFPTAEAAACAYDEAARAMYG 182
689****999.**********8...3.35************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 418 aa
Download sequence Send
to blast |
MTVDQRTTAK AIMPPVEMPP VQPGRKCGGE ESTGNLDSVQ PIGALPCNEH ALLAQQTPKG 60 DAPSVGSKIW KKRPRRSRDG PTSVAETIKR WAELNNQQEL DPQGPKKARK APAKGSKKGC 120 MKGKGGPENT RCDFRGVRQR TWGKWVAEIR EPNRQSRLWL GTFPTAEAAA CAYDEAARAM 180 YGAMARTNFG QHHAPAASVQ VAQAAVKCAL PGGGLTASKS RTSTQGASAD VQDVLTGCLS 240 ACESTTTTIN NQSDVVSTLH KPEEVSEISS PLRAPPAVLE DGSNEDKAES VTYDENIVSQ 300 QRAPPEAEAS NGRGEEVFEP LEPIASLPED QGDYCFDIDE MLRMMEADPT NEGLWKGDKD 360 GSDAILELGQ DEPFYYEGVD PGMLDNLLRS DEPAWLSADP AMFISGGFED DSQFFEGL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF915845 | 0.0 | JF915845.1 Oryza sativa dehydration responsive element binding protein 2B isoform c (DREB2B) mRNA, complete cds, alternatively spliced. |