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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART05G07970.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
C2H2 |
Protein Properties |
Length: 210aa MW: 21451.5 Da PI: 6.1506 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART05G07970.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C++ F++ L H++ H
OBART05G07970.1 47 YECVFCKRGFTTAQALGGHMNIH 69
99*******************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MDMDDGSSKG SRADESVSSL GTDDHAAAAE PMSSSPPPAT ATARPYYECV FCKRGFTTAQ 60 ALGGHMNIHR RDRAAKPAGP GAAAPPRDAS TTAVSRSVDC YSQFRHLAAA YPVPAATSGA 120 AGTAGSSSSF TMYYGGTGAG AEAAVVAGPR ELSLFDAATD HGLHLGVGRR GGGGDGGESR 180 TPEGSEQQVA GELPERELDL ELRLGRHTKQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC145477 | 0.0 | AC145477.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone B1402B06, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |