 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART05G01300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WOX |
| Protein Properties |
Length: 285aa MW: 29790.6 Da PI: 8.2328 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART05G01300.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.5 | 6.3e-20 | 26 | 85 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++
OBART05G01300.1 26 TRWCPTPEQLMMLEEMYRGgLRTPNAAQIQQITAHLstygRIEGKNVFYWFQNHKARDRQ 85
8*****************99*************************************996 PP
|
| 2 | Wus_type_Homeobox | 118.7 | 2.5e-38 | 24 | 86 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
++tRW+PtpeQ+++Lee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk
OBART05G01300.1 24 STTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
579***********************************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MAPAVQQQQS GGGGGSTGAA AVVSTTRWCP TPEQLMMLEE MYRGGLRTPN AAQIQQITAH 60
LSTYGRIEGK NVFYWFQNHK ARDRQKLRRR LCISHHLLSC AHYYHHHLAA AAAAVPPPQL 120
LPPLHPSSSS SCGGGLIDHA NSLLSPTSAT TPTSAAAAAA AAAYTTSYYY PFTAAAAPPP 180
PRTSPAASPL FHYNQGGGGV VLPAAEAIGR SSSSSDYSLG KLVDNFGVAL EEAFPAQPQQ 240
PATTMAMTAV VDTTAVAAAA GGFCRPLKTL DLFPGGLKEE QHDVV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AM490244 | 0.0 | AM490244.1 Oryza sativa mRNA for putative wuschel homeobox protein (wox3 gene). |
