 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART05G00910.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 355aa MW: 36871 Da PI: 8.5766 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART05G00910.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 118.2 | 3.2e-37 | 103 | 161 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
e lkcprCdstntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+
OBART05G00910.1 103 EPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 161
56789************************************************998765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MIFPPAFLDS SSWNDNNNNN HNQQQQQQQQ QHAHGHHQHH QVATGCGGGG GGGDGNNSHE 60
LLQQQSMIPG TLADGGGGGG AVGPAKPMSM SERARLARIP LPEPGLKCPR CDSTNTKFCY 120
FNNYSLSQPR HFCRACRRYW TRGGALRNVP VGGGYRRHAK RAKPKPASAA GSASAATTTA 180
GSTPAGSTTT TTSSTCATPN APALPAMLGG NLSILPPLLR LADFDAMSLG STFSGMAAAA 240
GKPPPVDAAG CYSVGAATGL EQWRLQQMQS FPFFHAMDHQ AAMAAPPPAM AMPGMFQLGL 300
DGDGHGGGGG EDGGELHHAM PSSKREGYPR GMYGDHHLAG GYTSYSSATT GNHLL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108933 | 0.0 | AK108933.1 Oryza sativa Japonica Group cDNA clone:002-153-A09, full insert sequence. |
