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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART04G27520.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 100aa MW: 11488.9 Da PI: 11.0234 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART04G27520.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 29 | 2.7e-09 | 31 | 57 | 2 | 32 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfs 32
+y+GVr +k +g+WvAeIr+p + r+r++
OBART04G27520.1 31 QYRGVRMRK-WGKWVAEIREPHK---RTRIW 57
6******99.**********732...36655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK061095 | 3e-74 | AK061095.1 Oryza sativa Japonica Group cDNA clone:006-207-A04, full insert sequence. |
GenBank | AK099333 | 3e-74 | AK099333.1 Oryza sativa Japonica Group cDNA clone:J033003O11, full insert sequence. |
GenBank | AL606635 | 3e-74 | AL606635.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence. |
GenBank | AP014960 | 3e-74 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |