 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART04G24010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 277aa MW: 30660.9 Da PI: 8.7606 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART04G24010.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.1 | 9.3e-34 | 19 | 73 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWtp+LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl
OBART04G24010.1 19 KPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 73
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MFEGCYGGVG SAAATRDPKP RLRWTPDLHE RFVDAVTRLG GPDKATPKSV LRLMGMKGLT 60
LYHLKSHLQK YRLGRQSKKS AGLELAVADS GEFTAEGISF SIGAPPRNPA GGNNTGEIPL 120
ADALKYQVEV HRKLQEQLEV QKKLQMRIEA QGRYLKEILE KAQKNIPPDA NGSANLSSTR 180
SQITDINLAL SGFMDNATQV QEENNELMKP ISDDNLKVNN LGFQLYHLGS QESKDVKCTP 240
KTEELLLLDL NIQGGYELSS RGMQGCELDL KINQQRR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-21 | 19 | 75 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-21 | 19 | 75 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-21 | 19 | 75 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-21 | 19 | 75 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK106400 | 0.0 | AK106400.1 Oryza sativa Japonica Group cDNA clone:002-102-G05, full insert sequence. |
