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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART04G12870.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 382aa MW: 40761.1 Da PI: 4.5245 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART04G12870.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.4 | 6.3e-14 | 133 | 181 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++h Er RR++++++fe L l+P++ +K +Ka+i+e +++YIk+Lq
OBART04G12870.1 133 KMHVLTERERRKEMKNKFEILHALIPNL----PEKTDKATIVEATINYIKNLQ 181
579999*********************6....39******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MSQEGPNNHP QGTQETHDCP FTIATNTPLG STKMGYSDSR KFDENNTSSK PASPVVSSDV 60 VEIKETWENV VVADEEGEGG EDGFASDASE SKSKSSSDEV DYELLDLLAG AREGCSGGNN 120 NDEVKNFAYA DHKMHVLTER ERRKEMKNKF EILHALIPNL PEKTDKATIV EATINYIKNL 180 QDKIHKMEML KVEREHAIAL AAAAAAATAT ATAAASADTA LQAPPPPSEE ENEEEHDSVV 240 AAATREMALA DMVHAWEQQQ EAAATGGSHG GHAVPPPPPP AASLQTWTGP NMTASLTGDD 300 GFITLSLPHQ GGQKNLVAGA VSVLERHHID VVTATVSASE QGDNLISLHC HLSPGSSSSQ 360 NLTPLDKFKL AMSELMLWVI SV
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK107268 | 0.0 | AK107268.1 Oryza sativa Japonica Group cDNA clone:002-125-H08, full insert sequence. |