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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART04G12180.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
E2F/DP |
Protein Properties |
Length: 385aa MW: 43385.9 Da PI: 5.5172 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART04G12180.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 45.8 | 1e-14 | 113 | 144 | 38 | 71 |
E2F_TDP 38 dvknkrRRiYDilNVLealnliekkekneirwkg 71
+v ++RRiYDi+NVLe+ +liekk kn+irw+g
OBART04G12180.1 113 QV--RKRRIYDITNVLEGTGLIEKKLKNRIRWRG 144
34..8***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MTRHRHLHDP PPLLRLLRER LPPLLCERRP QPRLRRLSSL KRKTPCGESE AAESSERMMT 60 SPGFTEGVGS PLMTPVSGKS SRTTKSMAKF NKAGPQTPIS NAGKFIYGFQ QKQVRKRRIY 120 DITNVLEGTG LIEKKLKNRI RWRGSDDSGT NLDSDISCLK TEVENLYIQE QALDRSISEI 180 REKMEELTED ESNHRWLFVT EDDIKGLPCF QNEALIAIKG PRGTTVEVPD PDELLPQKKL 240 SDEHPYYIIS QYKKMEELGE TATPPRHASV VEPPSIATEA GHSSKQTMPL NVQQDIQETP 300 ELNASRAFGR MKKITPSDVD TDADYWLLTD DDISITHMWT TASEMQWDQI DTNDFLAEEI 360 SDTPCALNQP SAAASEPTGV GFNHG
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 114 | 136 | RKRRIYDITNVLEGTGLIEKKLK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK067581 | 0.0 | AK067581.1 Oryza sativa Japonica Group cDNA clone:J013113N12, full insert sequence. |