 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART03G38300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 254aa MW: 27716.4 Da PI: 5.7535 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART03G38300.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 31.5 | 3.8e-10 | 125 | 151 | 1 | 27 |
XXXXCHHHCHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkae 27
e+elkrerrkq+NRe+ArrsR+RK+++
OBART03G38300.1 125 ERELKRERRKQSNRESARRSRLRKQER 151
89***********************97 PP
|
| 2 | bZIP_1 | 28.4 | 3.6e-09 | 171 | 208 | 26 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+e+eeL +kv L+a N++L+ el++lkk ++ +++e+
OBART03G38300.1 171 QECEELSQKVTDLTAVNSTLRTELDKLKKDCEDMEAEN 208
89********************************9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MAGCAVPSAA AEGKSKRKTS GGPSGEDSSG SGDGGSEDSS ERRDDADEKG LSPAKWRKLG 60
HPDIEGETSQ AAAMSEQNPV KAAPNLNIGM DIWSNSTMAA MPSGQVEVNA GTHLRRDKAL 120
SQMDERELKR ERRKQSNRES ARRSRLRKQE RPTSFCHPPN YPVTFYGLTN QECEELSQKV 180
TDLTAVNSTL RTELDKLKKD CEDMEAENSQ LMDEMVQSEG SSVIATLSIK IDTSKDRHGS 240
SSQLNKHTND DSKG
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 141 | 147 | RRSRLRK |
| 2 | 141 | 148 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK102250 | 1e-133 | AK102250.1 Oryza sativa Japonica Group cDNA clone:J033088G19, full insert sequence. |
