 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART03G36060.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 374aa MW: 41226.1 Da PI: 6.5087 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART03G36060.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.6 | 7e-51 | 39 | 170 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s
OBART03G36060.1 39 LPGFRFHPTDEELVTFYLQRKVARKSLSI-EIIKEMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYS 131
69***************************.89***************445556889************************************** PP
NAM 95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl
OBART03G36060.1 132 AavnsnSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 170
9888888888***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MVTSKEFARD QAAMDQKIKS DVGEVVLAGD EEEDGDVVLP GFRFHPTDEE LVTFYLQRKV 60
ARKSLSIEII KEMDIYKHDP WDLPKASTVG GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW 120
KATGIDRPIY SAAVNSNSGE SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAIAAADAS 180
PCMQEAVSTH SHALMLVRSP SPSSSRPRGL DHLQNLQEKH HLQEAAAAAG LEAAGAGAGD 240
GDRQGPTDGG GDEFMNCGLT PAISQQQQHG GRHQMMSTMS CNGGYFFNDG IHHSHSHHKL 300
HSQWGSLQMA PPEPKPEPEQ KPLSSPAMTI AFHQNDHGFP AAAADFYKDG YLEEIARMME 360
VADPSPTGFY DCRY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-46 | 40 | 170 | 19 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-46 | 40 | 170 | 19 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-46 | 40 | 170 | 19 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-46 | 40 | 170 | 19 | 142 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swm_B | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swm_C | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swm_D | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swp_A | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swp_B | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swp_C | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 3swp_D | 5e-46 | 40 | 170 | 22 | 145 | NAC domain-containing protein 19 |
| 4dul_A | 6e-46 | 40 | 170 | 19 | 142 | NAC domain-containing protein 19 |
| 4dul_B | 6e-46 | 40 | 170 | 19 | 142 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK073539 | 0.0 | AK073539.1 Oryza sativa Japonica Group cDNA clone:J033041C24, full insert sequence. |
